jebl.evolution.align.scores

Class Hamming

java.lang.Object

jebl.evolution.align.scores.Scores

jebl.evolution.align.scores.NucleotideScores

jebl.evolution.align.scores.Hamming

All Implemented Interfaces:

ScoreMatrix

public class Hamming
extends NucleotideScores

Version:

$Id: Hamming.java 185 2006-01-23 23:03:18Z rambaut $

Author:

Andrew Rambaut

Field Summary

Fields inherited from class jebl.evolution.align.scores.NucleotideScores

CLUSTALW, IUB

Fields inherited from class jebl.evolution.align.scores.Scores

score

Constructor Summary

Constructors

Constructor and Description
Hamming()

Method Summary

Methods

Modifier and Type	Method and Description
java.lang.String	toString()

Methods inherited from class jebl.evolution.align.scores.NucleotideScores

getAlphabet, getName

Methods inherited from class jebl.evolution.align.scores.Scores

duplicate, forMatrix, getMatrixString, getScore, includeAdditionalCharacters, includeGaps

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

Hamming

public Hamming()

Method Detail

toString

public java.lang.String toString()

Overrides:

toString in class NucleotideScores