jebl.evolution.io

Class FastaExporter

java.lang.Object

jebl.evolution.io.FastaExporter

All Implemented Interfaces:

SequenceExporter

public class FastaExporter
extends java.lang.Object
implements SequenceExporter

Class for exporting a fasta file format.

Version:

$Id: FastaExporter.java 442 2006-09-05 21:59:20Z matt_kearse $

Author:

Andrew Rambaut, Alexei Drummond

Constructor Summary

Constructors

Constructor and Description
FastaExporter(java.io.Writer writer) Constructor

Method Summary

Methods

Modifier and Type	Method and Description
void	exportSequences(java.util.Collection<? extends Sequence> sequences) export alignment or set of sequences.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FastaExporter

public FastaExporter(java.io.Writer writer)

Constructor

Method Detail

exportSequences

public void exportSequences(java.util.Collection<? extends Sequence> sequences)
                     throws java.io.IOException

export alignment or set of sequences.

Specified by:

exportSequences in interface SequenceExporter

Throws:

java.io.IOException