jebl.evolution.treemetrics

Class RobinsonsFouldMetric

java.lang.Object

jebl.evolution.treemetrics.RobinsonsFouldMetric

All Implemented Interfaces:

RootedTreeMetric

public class RobinsonsFouldMetric
extends java.lang.Object
implements RootedTreeMetric

Version:

$Id$

Author:

Andrew Rambaut

Constructor Summary

Constructors

Constructor and Description
RobinsonsFouldMetric()
RobinsonsFouldMetric(java.util.List<Taxon> taxa)

Method Summary

Methods

Modifier and Type	Method and Description
double	getMetric(RootedTree tree1, RootedTree tree2) calculates the metric between two rooted trees

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

RobinsonsFouldMetric

public RobinsonsFouldMetric()

RobinsonsFouldMetric

public RobinsonsFouldMetric(java.util.List<Taxon> taxa)

Method Detail

getMetric

public double getMetric(RootedTree tree1,
               RootedTree tree2)

Description copied from interface: RootedTreeMetric

calculates the metric between two rooted trees

Specified by:

getMetric in interface RootedTreeMetric

Parameters:

tree1 - first tree

tree2 - second tree

Returns:

the tree metric value