jebl.evolution.trees

Class ReRootedTree

java.lang.Object

jebl.evolution.trees.FilteredRootedTree

jebl.evolution.trees.ReRootedTree

All Implemented Interfaces:

Graph, RootedTree, Tree, Attributable

public class ReRootedTree
extends FilteredRootedTree

Version:

$Id: ReRootedTree.java 776 2007-09-05 11:17:12Z rambaut $

Author:

Andrew Rambaut, Alexei Drummond

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	ReRootedTree.RootingType

Nested classes/interfaces inherited from interface jebl.evolution.graphs.Graph

Graph.NoEdgeException, Graph.Utils

Constructor Summary

Constructors

Constructor and Description
ReRootedTree(RootedTree source, ReRootedTree.RootingType rootingType)

Method Summary

Methods inherited from class jebl.evolution.trees.FilteredRootedTree

conceptuallyUnrooted, getAdjacencies, getAttribute, getAttributeMap, getAttributeNames, getChildren, getEdge, getEdgeLength, getEdges, getEdges, getExternalEdges, getExternalNodes, getHeight, getInternalEdges, getInternalNodes, getLength, getNode, getNodes, getNodes, getNodes, getParent, getRootNode, getSource, getTaxa, getTaxon, hasHeights, hasLengths, isExternal, isRoot, removeAttribute, renameTaxa, setAttribute

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ReRootedTree

public ReRootedTree(RootedTree source,
            ReRootedTree.RootingType rootingType)