Uses of Class
org.snpeff.fileIterator.RegulationFileIterator

Packages that use RegulationFileIterator

Package	Description
org.snpeff
org.snpeff.fileIterator

Uses of RegulationFileIterator in org.snpeff

Methods in org.snpeff with parameters of type RegulationFileIterator

Modifier and Type	Method	Description
void	RegulationFileConsensus.readFile(RegulationFileIterator regulationFileIterator)	Read a file and add all regulation intervals
void	RegulationFileSplitBytType.splitFile(RegulationFileIterator regulationFileIterator, java.lang.String path)	Read a regulation file and split into one file for each "regulation type"

Uses of RegulationFileIterator in org.snpeff.fileIterator

Subclasses of RegulationFileIterator in org.snpeff.fileIterator

Modifier and Type	Class	Description
class	RegulationBedFileIterator	Opens a GFF3 file and create regulatory elements.
class	RegulationGffFileIterator	Opens a GFF3 file and create regulatory elements.