Uses of Class org.snpeff.interval.TranscriptSupportLevel (SnpEff 5.1 API)

Packages that use TranscriptSupportLevel
Package Description

org.snpeff

org.snpeff.interval

org.snpeff.snpEffect

Uses of TranscriptSupportLevel in org.snpeff

Fields in org.snpeff declared as TranscriptSupportLevel
Modifier and Type Field Description

protected TranscriptSupportLevel SnpEff.maxTranscriptSupportLevel

Uses of TranscriptSupportLevel in org.snpeff.interval

Methods in org.snpeff.interval that return TranscriptSupportLevel
Modifier and Type	Method	Description
`TranscriptSupportLevel`	Transcript.`getTranscriptSupportLevel()`
`static TranscriptSupportLevel`	TranscriptSupportLevel.`parse(java.lang.String str)`
`static TranscriptSupportLevel`	TranscriptSupportLevel.`valueOf(java.lang.String name)`	Returns the enum constant of this type with the specified name.
`static TranscriptSupportLevel[]`	TranscriptSupportLevel.`values()`	Returns an array containing the constants of this enum type, in the order they are declared.

Methods in org.snpeff.interval with parameters of type TranscriptSupportLevel
Modifier and Type	Method	Description
`void`	Gene.`filterTranscriptSupportLevel(TranscriptSupportLevel maxTsl)`	Filter transcripts by TSL
`void`	Transcript.`setTranscriptSupportLevel(TranscriptSupportLevel transcriptSupportLevel)`
`static int`	TranscriptSupportLevel.`tsl(TranscriptSupportLevel tsl)`	Return TSL level (-1 if not available / invalid)

Uses of TranscriptSupportLevel in org.snpeff.snpEffect

Methods in org.snpeff.snpEffect with parameters of type TranscriptSupportLevel
Modifier and Type	Method	Description
`void`	SnpEffectPredictor.`filterTranscriptSupportLevel(TranscriptSupportLevel maxTsl)`	Filter transcripts by TSL