Uses of Class
org.snpeff.pdb.IdMapperEntry

Packages that use IdMapperEntry

Package	Description
org.snpeff.pdb

Uses of IdMapperEntry in org.snpeff.pdb

Methods in org.snpeff.pdb that return IdMapperEntry

Modifier and Type	Method	Description
IdMapperEntry	IdMapperEntry.cloneAndSet(java.lang.String chainId, int pdbAaLen, int trAaLen)	Clone the object and return a copy having a different chain ID

Methods in org.snpeff.pdb that return types with arguments of type IdMapperEntry

Modifier and Type	Method	Description
java.util.List<IdMapperEntry>	IdMapper.getByPdbId(java.lang.String id)
java.util.List<IdMapperEntry>	IdMapper.getByPdbId(java.lang.String id, java.lang.String chainId)
java.util.List<IdMapperEntry>	IdMapper.getByTrId(java.lang.String id)
java.util.Collection<IdMapperEntry>	IdMapper.getEntries()

Methods in org.snpeff.pdb with parameters of type IdMapperEntry

Modifier and Type	Method	Description
void	IdMapper.add(IdMapperEntry ime)
int	IdMapperEntry.compareTo(IdMapperEntry o)

Method parameters in org.snpeff.pdb with type arguments of type IdMapperEntry

Modifier and Type	Method	Description
void	IdMapper.addAll(java.util.Collection<IdMapperEntry> imes)
static java.util.Set<java.lang.String>	IdMapper.transcriptIds(java.util.List<IdMapperEntry> ids)