Uses of Enum Class
org.snpeff.interval.TranscriptSupportLevel
Packages that use TranscriptSupportLevel
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Uses of TranscriptSupportLevel in org.snpeff
Fields in org.snpeff declared as TranscriptSupportLevelModifier and TypeFieldDescriptionprotected TranscriptSupportLevelSnpEff.maxTranscriptSupportLevel -
Uses of TranscriptSupportLevel in org.snpeff.interval
Methods in org.snpeff.interval that return TranscriptSupportLevelModifier and TypeMethodDescriptionTranscript.getTranscriptSupportLevel()static TranscriptSupportLevelstatic TranscriptSupportLevelReturns the enum constant of this class with the specified name.static TranscriptSupportLevel[]TranscriptSupportLevel.values()Returns an array containing the constants of this enum class, in the order they are declared.Methods in org.snpeff.interval with parameters of type TranscriptSupportLevelModifier and TypeMethodDescriptionvoidGene.filterTranscriptSupportLevel(TranscriptSupportLevel maxTsl) Filter transcripts by TSLvoidTranscript.setTranscriptSupportLevel(TranscriptSupportLevel transcriptSupportLevel) static intTranscriptSupportLevel.tsl(TranscriptSupportLevel tsl) Return TSL level (-1 if not available / invalid) -
Uses of TranscriptSupportLevel in org.snpeff.snpEffect
Methods in org.snpeff.snpEffect with parameters of type TranscriptSupportLevelModifier and TypeMethodDescriptionvoidSnpEffectPredictor.filterTranscriptSupportLevel(TranscriptSupportLevel maxTsl) Filter transcripts by TSL