PedFamily (SnpEff 5.2 API)

java.lang.Object

org.snpeff.ped.PedPedigree

org.snpeff.ped.PedFamily

All Implemented Interfaces:: Comparable<PedPedigree>, Iterable<TfamEntry>

public class PedFamily extends PedPedigree

A family: A group of Tfams with the same familyId

Author:: pcingola

Constructor Summary

Constructors

Constructor

Description

PedFamily()
Method Summary

Modifier and Type

Method

Description

void

add(TfamEntry tfamEntry)

Add an entry t this family

Methods inherited from class org.snpeff.ped.PedPedigree
compareTo, families, get, getFamilyId, getPlinkMap, getSampleIds, iterator, keySet, load, loadTfam, saveTfam, setVerbose, size, toString, values

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.lang.Iterable
forEach, spliterator

Constructor Details
- PedFamily
  
  public PedFamily()
Method Details
- add
  
  public void add(TfamEntry tfamEntry)
  
  Add an entry t this family
  
  Overrides:
  
  add in class PedPedigree
  
  Parameters:
  
  tfamEntry -